The ability to identify and temporally segment finegrained human actions throughout a video is crucial for robotics, surveillance, education, and beyond. Typical approaches decouple this problem by first extracting local spatiotemporal features from video frames and then feeding them into a temporal classifier that captures high-level temporal patterns. We introduce a new class of temporal models, which we call Temporal Convolutional Networks (TCNs), that use a hierarchy of temporal convolutions to perform fine-grained action segmentation or detection. Our Encoder-Decoder TCN uses pooling and upsampling to efficiently capture long-range temporal patterns whereas our Dilated TCN uses dilated convolutions. We show that TCNs are capable of capturing action compositions, segment durations, and long-range dependencies, and are over a magnitude faster to train than competing LSTM-based Recurrent Neural Networks. We apply these models to three challenging fine-grained datasets and show large improvements over the state of the art.
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Artificial Intelligence (AI) has become commonplace to solve routine everyday tasks. Because of the exponential growth in medical imaging data volume and complexity, the workload on radiologists is steadily increasing. We project that the gap between the number of imaging exams and the number of expert radiologist readers required to cover this increase will continue to expand, consequently introducing a demand for AI-based tools that improve the efficiency with which radiologists can comfortably interpret these exams. AI has been shown to improve efficiency in medical-image generation, processing, and interpretation, and a variety of such AI models have been developed across research labs worldwide. However, very few of these, if any, find their way into routine clinical use, a discrepancy that reflects the divide between AI research and successful AI translation. To address the barrier to clinical deployment, we have formed MONAI Consortium, an open-source community which is building standards for AI deployment in healthcare institutions, and developing tools and infrastructure to facilitate their implementation. This report represents several years of weekly discussions and hands-on problem solving experience by groups of industry experts and clinicians in the MONAI Consortium. We identify barriers between AI-model development in research labs and subsequent clinical deployment and propose solutions. Our report provides guidance on processes which take an imaging AI model from development to clinical implementation in a healthcare institution. We discuss various AI integration points in a clinical Radiology workflow. We also present a taxonomy of Radiology AI use-cases. Through this report, we intend to educate the stakeholders in healthcare and AI (AI researchers, radiologists, imaging informaticists, and regulators) about cross-disciplinary challenges and possible solutions.
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The reward hypothesis posits that, "all of what we mean by goals and purposes can be well thought of as maximization of the expected value of the cumulative sum of a received scalar signal (reward)." We aim to fully settle this hypothesis. This will not conclude with a simple affirmation or refutation, but rather specify completely the implicit requirements on goals and purposes under which the hypothesis holds.
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Estimating the probability of failure for complex real-world systems using high-fidelity computational models is often prohibitively expensive, especially when the probability is small. Exploiting low-fidelity models can make this process more feasible, but merging information from multiple low-fidelity and high-fidelity models poses several challenges. This paper presents a robust multi-fidelity surrogate modeling strategy in which the multi-fidelity surrogate is assembled using an active learning strategy using an on-the-fly model adequacy assessment set within a subset simulation framework for efficient reliability analysis. The multi-fidelity surrogate is assembled by first applying a Gaussian process correction to each low-fidelity model and assigning a model probability based on the model's local predictive accuracy and cost. Three strategies are proposed to fuse these individual surrogates into an overall surrogate model based on model averaging and deterministic/stochastic model selection. The strategies also dictate which model evaluations are necessary. No assumptions are made about the relationships between low-fidelity models, while the high-fidelity model is assumed to be the most accurate and most computationally expensive model. Through two analytical and two numerical case studies, including a case study evaluating the failure probability of Tristructural isotropic-coated (TRISO) nuclear fuels, the algorithm is shown to be highly accurate while drastically reducing the number of high-fidelity model calls (and hence computational cost).
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OutlierDetection.jl is an open-source ecosystem for outlier detection in Julia. It provides a range of high-performance outlier detection algorithms implemented directly in Julia. In contrast to previous packages, our ecosystem enables the development highly-scalable outlier detection algorithms using a high-level programming language. Additionally, it provides a standardized, yet flexible, interface for future outlier detection algorithms and allows for model composition unseen in previous packages. Best practices such as unit testing, continuous integration, and code coverage reporting are enforced across the ecosystem. The most recent version of OutlierDetection.jl is available at https://github.com/OutlierDetectionJL/OutlierDetection.jl.
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Artificial Intelligence (AI) is having a tremendous impact across most areas of science. Applications of AI in healthcare have the potential to improve our ability to detect, diagnose, prognose, and intervene on human disease. For AI models to be used clinically, they need to be made safe, reproducible and robust, and the underlying software framework must be aware of the particularities (e.g. geometry, physiology, physics) of medical data being processed. This work introduces MONAI, a freely available, community-supported, and consortium-led PyTorch-based framework for deep learning in healthcare. MONAI extends PyTorch to support medical data, with a particular focus on imaging, and provide purpose-specific AI model architectures, transformations and utilities that streamline the development and deployment of medical AI models. MONAI follows best practices for software-development, providing an easy-to-use, robust, well-documented, and well-tested software framework. MONAI preserves the simple, additive, and compositional approach of its underlying PyTorch libraries. MONAI is being used by and receiving contributions from research, clinical and industrial teams from around the world, who are pursuing applications spanning nearly every aspect of healthcare.
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尽管No-U-Turn采样器(螺母)是执行贝叶斯推断的广泛采用方法,但它需要许多后梯度,在实践中计算可能很昂贵。最近,人们对基于物理的动力学(或哈密顿)系统和哈密顿神经网络(HNNS)的机器学习引起了重大兴趣。但是,这些类型的体系结构尚未应用于有效地解决贝叶斯推论问题。我们建议使用HNN有效地进行贝叶斯推断,而无需大量的后梯度。我们向HNNS(L-HNN)引入潜在变量输出,以提高表达性和减少的集成误差。我们将L-HNN集成在坚果中,并进一步提出一种在线错误监控方案,以防止L-HNNS可能几乎没有培训数据的区域中采样堕落。考虑到几种复杂的高维后密度,并将其性能与螺母进行比较,我们证明了在线错误监测中的L-HNN。
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元学习是机器学习的一个分支,旨在将相关任务分布的数据合成以有效地解决新的数据。在过程控制中,许多系统具有相似且充分理解的动力学,这表明可以通过元学习创建可推广的控制器是可行的。在这项工作中,我们制定了一种元加强学习(META-RL)控制策略,该策略利用已知的离线信息进行培训,例如模型结构。对模型参数的分布而不是单个模型,对元RL代理进行了训练,从而使代理能够自动适应过程动力学的变化,同时保持性能。一个关键的设计元素是能够在培训期间离线利用基于模型的信息,同时保持与新环境交互的无模型策略结构。我们以前的工作已经证明了如何将这种方法应用于调整比例综合控制器以控制一阶过程的与工业相关的问题。在这项工作中,我们简要地重新引入了我们的方法,并证明了如何将其扩展到比例综合衍生的控制器和二阶系统。
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噪声的去除或取消对成像和声学具有广泛的应用。在日常生活中,Denoising甚至可能包括对地面真理不忠的生成方面。但是,对于科学应用,denoing必须准确地重现地面真相。在这里,我们展示了如何通过深层卷积神经网络来定位数据,从而以定量精度出现弱信号。特别是,我们研究了晶体材料的X射线衍射。我们证明,弱信号是由电荷排序引起的,在嘈杂的数据中微不足道的信号,在DeNo的数据中变得可见和准确。通过对深度神经网络的监督培训,具有成对的低噪声数据,可以通过监督培训来实现这一成功。这样,神经网络就可以了解噪声的统计特性。我们证明,使用人造噪声(例如泊松和高斯)不会产生这种定量准确的结果。因此,我们的方法说明了一种实用的噪声过滤策略,可以应用于具有挑战性的获取问题。
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通用数据模型解决了标准化电子健康记录(EHR)数据的许多挑战,但无法将其集成深度表型所需的资源。开放的生物学和生物医学本体论(OBO)铸造本体论提供了可用于生物学知识的语义计算表示,并能够整合多种生物医学数据。但是,将EHR数据映射到OBO Foundry本体论需要大量的手动策展和域专业知识。我们介绍了一个框架,用于将观察性医学成果合作伙伴关系(OMOP)标准词汇介绍给OBO铸造本体。使用此框架,我们制作了92,367条条件,8,615种药物成分和10,673个测量结果的映射。域专家验证了映射准确性,并且在24家医院进行检查时,映射覆盖了99%的条件和药物成分和68%的测量结果。最后,我们证明OMOP2OBO映射可以帮助系统地识别可能受益于基因检测的未诊断罕见病患者。
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