欧文（Owen）和霍伊特（Hoyt）最近表明，有效维度提供了有关人工神经网络基础的投入输出映射的关键结构信息。沿着这一研究，这项工作提出了一个估算过程，该过程允许从给定数据集计算平均维度，而无需重新采样外部分布。当功能独立时，当特征相关时，设计会产生总索引。我们表明，这种变体具有零独立性。使用合成数据集，我们分析了平均维度如何按一层演化，以及激活函数如何影响相互作用的幅度。然后，我们使用平均维度来研究一些用于图像识别的最广泛使用的卷积架构（Lenet，Resnet，Densenet）。为了说明像素相关性，我们建议在添加逆PCA层后计算平均尺寸，该层允许人们在无关的PCA转换功能上工作，而无需重新训练神经网络。我们使用广义的总索引来生产热图用于事后解释，并且我们在PCA转换特征上采用了平均维度来进行人工神经网络结构的交叉比较。结果提供了有关架构之间相互作用幅度差异的几个见解，以及有关训练过程中平均维度如何演变的指示。

我们通过将其基于实现功能空间而不是参数空间的几何形状来系统地研究深度神经网络景观的方法。将分类器分组到等效类中，我们开发了一个标准化的参数化，其中所有对称性都被删除，从而导致环形拓扑。在这个空间上，我们探讨了误差景观而不是损失。这使我们能够得出有意义的概念，即最小化器的平坦度和连接它们的地球通道的概念。使用不同的优化算法，这些算法采样具有不同平坦度的最小化器，我们研究模式连接性和相对距离。测试各种最先进的体系结构和基准数据集，我们确认了平面度和泛化性能之间的相关性；我们进一步表明，在功能空间中，minima彼此更近，并且连接它们的大地测量学的屏障很小。我们还发现，通过梯度下降的变体发现的最小化器可以通过由参数空间中的两个直线组成的零误差路径连接，即带有单个弯曲的多边形链。我们观察到具有二进制权重和激活的神经网络中相似的定性结果，这为在这种情况下的连通性提供了第一个结果之一。我们的结果取决于对称性的去除，并且与对简单浅层模型进行的一些分析研究所描述的丰富现象学非常吻合。

在神经网络的经验风险景观中扁平最小值的性质已经讨论了一段时间。越来越多的证据表明他们对尖锐物质具有更好的泛化能力。首先，我们讨论高斯混合分类模型，并分析显示存在贝叶斯最佳点估算器，其对应于属于宽平区域的最小值。可以通过直接在分类器（通常是独立的）或学习中使用的可分解损耗函数上应用最大平坦度算法来找到这些估计器。接下来，我们通过广泛的数值验证将分析扩展到深度学习场景。使用两种算法，熵-SGD和复制-SGD，明确地包括在优化目标中，所谓的非局部平整度措施称为本地熵，我们一直提高常见架构的泛化误差（例如Resnet，CeffectnNet）。易于计算的平坦度测量显示与测试精度明确的相关性。

Deep-learning of artificial neural networks (ANNs) is creating highly functional tools that are, unfortunately, as hard to interpret as their natural counterparts. While it is possible to identify functional modules in natural brains using technologies such as fMRI, we do not have at our disposal similarly robust methods for artificial neural networks. Ideally, understanding which parts of an artificial neural network perform what function might help us to address a number of vexing problems in ANN research, such as catastrophic forgetting and overfitting. Furthermore, revealing a network's modularity could improve our trust in them by making these black boxes more transparent. Here we introduce a new information-theoretic concept that proves useful in understanding and analyzing a network's functional modularity: the relay information $I_R$. The relay information measures how much information groups of neurons that participate in a particular function (modules) relay from inputs to outputs. Combined with a greedy search algorithm, relay information can be used to {\em identify} computational modules in neural networks. We also show that the functionality of modules correlates with the amount of relay information they carry.

Cashews are grown by over 3 million smallholders in more than 40 countries worldwide as a principal source of income. As the third largest cashew producer in Africa, Benin has nearly 200,000 smallholder cashew growers contributing 15% of the country's national export earnings. However, a lack of information on where and how cashew trees grow across the country hinders decision-making that could support increased cashew production and poverty alleviation. By leveraging 2.4-m Planet Basemaps and 0.5-m aerial imagery, newly developed deep learning algorithms, and large-scale ground truth datasets, we successfully produced the first national map of cashew in Benin and characterized the expansion of cashew plantations between 2015 and 2021. In particular, we developed a SpatioTemporal Classification with Attention (STCA) model to map the distribution of cashew plantations, which can fully capture texture information from discriminative time steps during a growing season. We further developed a Clustering Augmented Self-supervised Temporal Classification (CASTC) model to distinguish high-density versus low-density cashew plantations by automatic feature extraction and optimized clustering. Results show that the STCA model has an overall accuracy of 80% and the CASTC model achieved an overall accuracy of 77.9%. We found that the cashew area in Benin has doubled from 2015 to 2021 with 60% of new plantation development coming from cropland or fallow land, while encroachment of cashew plantations into protected areas has increased by 70%. Only half of cashew plantations were high-density in 2021, suggesting high potential for intensification. Our study illustrates the power of combining high-resolution remote sensing imagery and state-of-the-art deep learning algorithms to better understand tree crops in the heterogeneous smallholder landscape.

Local patterns play an important role in statistical physics as well as in image processing. Two-dimensional ordinal patterns were studied by Ribeiro et al. who determined permutation entropy and complexity in order to classify paintings and images of liquid crystals. Here we find that the 2 by 2 patterns of neighboring pixels come in three types. The statistics of these types, expressed by two parameters, contains the relevant information to describe and distinguish textures. The parameters are most stable and informative for isotropic structures.

It is well known that conservative mechanical systems exhibit local oscillatory behaviours due to their elastic and gravitational potentials, which completely characterise these periodic motions together with the inertial properties of the system. The classification of these periodic behaviours and their geometric characterisation are in an on-going secular debate, which recently led to the so-called eigenmanifold theory. The eigenmanifold characterises nonlinear oscillations as a generalisation of linear eigenspaces. With the motivation of performing periodic tasks efficiently, we use tools coming from this theory to construct an optimization problem aimed at inducing desired closed-loop oscillations through a state feedback law. We solve the constructed optimization problem via gradient-descent methods involving neural networks. Extensive simulations show the validity of the approach.

Artificial intelligence(AI) systems based on deep neural networks (DNNs) and machine learning (ML) algorithms are increasingly used to solve critical problems in bioinformatics, biomedical informatics, and precision medicine. However, complex DNN or ML models that are unavoidably opaque and perceived as black-box methods, may not be able to explain why and how they make certain decisions. Such black-box models are difficult to comprehend not only for targeted users and decision-makers but also for AI developers. Besides, in sensitive areas like healthcare, explainability and accountability are not only desirable properties of AI but also legal requirements -- especially when AI may have significant impacts on human lives. Explainable artificial intelligence (XAI) is an emerging field that aims to mitigate the opaqueness of black-box models and make it possible to interpret how AI systems make their decisions with transparency. An interpretable ML model can explain how it makes predictions and which factors affect the model's outcomes. The majority of state-of-the-art interpretable ML methods have been developed in a domain-agnostic way and originate from computer vision, automated reasoning, or even statistics. Many of these methods cannot be directly applied to bioinformatics problems, without prior customization, extension, and domain adoption. In this paper, we discuss the importance of explainability with a focus on bioinformatics. We analyse and comprehensively overview of model-specific and model-agnostic interpretable ML methods and tools. Via several case studies covering bioimaging, cancer genomics, and biomedical text mining, we show how bioinformatics research could benefit from XAI methods and how they could help improve decision fairness.

Generic Object Tracking (GOT) is the problem of tracking target objects, specified by bounding boxes in the first frame of a video. While the task has received much attention in the last decades, researchers have almost exclusively focused on the single object setting. Multi-object GOT benefits from a wider applicability, rendering it more attractive in real-world applications. We attribute the lack of research interest into this problem to the absence of suitable benchmarks. In this work, we introduce a new large-scale GOT benchmark, LaGOT, containing multiple annotated target objects per sequence. Our benchmark allows researchers to tackle key remaining challenges in GOT, aiming to increase robustness and reduce computation through joint tracking of multiple objects simultaneously. Furthermore, we propose a Transformer-based GOT tracker TaMOS capable of joint processing of multiple objects through shared computation. TaMOs achieves a 4x faster run-time in case of 10 concurrent objects compared to tracking each object independently and outperforms existing single object trackers on our new benchmark. Finally, TaMOs achieves highly competitive results on single-object GOT datasets, setting a new state-of-the-art on TrackingNet with a success rate AUC of 84.4%. Our benchmark, code, and trained models will be made publicly available.

In recent years the applications of machine learning models have increased rapidly, due to the large amount of available data and technological progress.While some domains like web analysis can benefit from this with only minor restrictions, other fields like in medicine with patient data are strongerregulated. In particular \emph{data privacy} plays an important role as recently highlighted by the trustworthy AI initiative of the EU or general privacy regulations in legislation. Another major challenge is, that the required training \emph{data is} often \emph{distributed} in terms of features or samples and unavailable for classicalbatch learning approaches. In 2016 Google came up with a framework, called \emph{Federated Learning} to solve both of these problems. We provide a brief overview on existing Methods and Applications in the field of vertical and horizontal \emph{Federated Learning}, as well as \emph{Fderated Transfer Learning}.