The number of international benchmarking competitions is steadily increasing in various fields of machine learning (ML) research and practice. So far, however, little is known about the common practice as well as bottlenecks faced by the community in tackling the research questions posed. To shed light on the status quo of algorithm development in the specific field of biomedical imaging analysis, we designed an international survey that was issued to all participants of challenges conducted in conjunction with the IEEE ISBI 2021 and MICCAI 2021 conferences (80 competitions in total). The survey covered participants' expertise and working environments, their chosen strategies, as well as algorithm characteristics. A median of 72% challenge participants took part in the survey. According to our results, knowledge exchange was the primary incentive (70%) for participation, while the reception of prize money played only a minor role (16%). While a median of 80 working hours was spent on method development, a large portion of participants stated that they did not have enough time for method development (32%). 25% perceived the infrastructure to be a bottleneck. Overall, 94% of all solutions were deep learning-based. Of these, 84% were based on standard architectures. 43% of the respondents reported that the data samples (e.g., images) were too large to be processed at once. This was most commonly addressed by patch-based training (69%), downsampling (37%), and solving 3D analysis tasks as a series of 2D tasks. K-fold cross-validation on the training set was performed by only 37% of the participants and only 50% of the participants performed ensembling based on multiple identical models (61%) or heterogeneous models (39%). 48% of the respondents applied postprocessing steps.
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深神经网络(DNN)的记忆效果在许多最先进的标签噪声学习方法中起着枢轴作用。为了利用这一财产,通常采用早期停止训练早期优化的伎俩。目前的方法通常通过考虑整个DNN来决定早期停止点。然而,DNN可以被认为是一系列层的组成,并且发现DNN中的后一个层对标签噪声更敏感,而其前同行是非常稳健的。因此,选择整个网络的停止点可以使不同的DNN层对抗彼此影响,从而降低最终性能。在本文中,我们建议将DNN分离为不同的部位,逐步培训它们以解决这个问题。而不是早期停止,它一次列举一个整体DNN,我们最初通过用相对大量的时期优化DNN来训练前DNN层。在培训期间,我们通过使用较少数量的时期使用较少的地层来逐步培训后者DNN层,以抵消嘈杂标签的影响。我们将所提出的方法术语作为渐进式早期停止(PES)。尽管其简单性,与早期停止相比,PES可以帮助获得更有前景和稳定的结果。此外,通过将PE与现有的嘈杂标签培训相结合,我们在图像分类基准上实现了最先进的性能。
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Dynamic Graph Neural Networks (DGNNs) have been broadly applied in various real-life applications, such as link prediction and pandemic forecast, to capture both static structural information and temporal characteristics from dynamic graphs. Combining both time-dependent and -independent components, DGNNs manifest substantial parallel computation and data reuse potentials, but suffer from severe memory access inefficiency and data transfer overhead under the canonical one-graph-at-a-time training pattern. To tackle the challenges, we propose PiPAD, a $\underline{\textbf{Pi}}pelined$ and $\underline{\textbf{PA}}rallel$ $\underline{\textbf{D}}GNN$ training framework for the end-to-end performance optimization on GPUs. From both the algorithm and runtime level, PiPAD holistically reconstructs the overall training paradigm from the data organization to computation manner. Capable of processing multiple graph snapshots in parallel, PiPAD eliminates the unnecessary data transmission and alleviates memory access inefficiency to improve the overall performance. Our evaluation across various datasets shows PiPAD achieves $1.22\times$-$9.57\times$ speedup over the state-of-the-art DGNN frameworks on three representative models.
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It has been observed in practice that applying pruning-at-initialization methods to neural networks and training the sparsified networks can not only retain the testing performance of the original dense models, but also sometimes even slightly boost the generalization performance. Theoretical understanding for such experimental observations are yet to be developed. This work makes the first attempt to study how different pruning fractions affect the model's gradient descent dynamics and generalization. Specifically, this work considers a classification task for overparameterized two-layer neural networks, where the network is randomly pruned according to different rates at the initialization. It is shown that as long as the pruning fraction is below a certain threshold, gradient descent can drive the training loss toward zero and the network exhibits good generalization performance. More surprisingly, the generalization bound gets better as the pruning fraction gets larger. To complement this positive result, this work further shows a negative result: there exists a large pruning fraction such that while gradient descent is still able to drive the training loss toward zero (by memorizing noise), the generalization performance is no better than random guessing. This further suggests that pruning can change the feature learning process, which leads to the performance drop of the pruned neural network. Up to our knowledge, this is the \textbf{first} generalization result for pruned neural networks, suggesting that pruning can improve the neural network's generalization.
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This work studies training one-hidden-layer overparameterized ReLU networks via gradient descent in the neural tangent kernel (NTK) regime, where, differently from the previous works, the networks' biases are trainable and are initialized to some constant rather than zero. The first set of results of this work characterize the convergence of the network's gradient descent dynamics. Surprisingly, it is shown that the network after sparsification can achieve as fast convergence as the original network. The contribution over previous work is that not only the bias is allowed to be updated by gradient descent under our setting but also a finer analysis is given such that the required width to ensure the network's closeness to its NTK is improved. Secondly, the networks' generalization bound after training is provided. A width-sparsity dependence is presented which yields sparsity-dependent localized Rademacher complexity and a generalization bound matching previous analysis (up to logarithmic factors). As a by-product, if the bias initialization is chosen to be zero, the width requirement improves the previous bound for the shallow networks' generalization. Lastly, since the generalization bound has dependence on the smallest eigenvalue of the limiting NTK and the bounds from previous works yield vacuous generalization, this work further studies the least eigenvalue of the limiting NTK. Surprisingly, while it is not shown that trainable biases are necessary, trainable bias helps to identify a nice data-dependent region where a much finer analysis of the NTK's smallest eigenvalue can be conducted, which leads to a much sharper lower bound than the previously known worst-case bound and, consequently, a non-vacuous generalization bound.
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We propose a novel teacher-student model for semi-supervised multi-organ segmentation. In teacher-student model, data augmentation is usually adopted on unlabeled data to regularize the consistent training between teacher and student. We start from a key perspective that fixed relative locations and variable sizes of different organs can provide distribution information where a multi-organ CT scan is drawn. Thus, we treat the prior anatomy as a strong tool to guide the data augmentation and reduce the mismatch between labeled and unlabeled images for semi-supervised learning. More specifically, we propose a data augmentation strategy based on partition-and-recovery N$^3$ cubes cross- and within- labeled and unlabeled images. Our strategy encourages unlabeled images to learn organ semantics in relative locations from the labeled images (cross-branch) and enhances the learning ability for small organs (within-branch). For within-branch, we further propose to refine the quality of pseudo labels by blending the learned representations from small cubes to incorporate local attributes. Our method is termed as MagicNet, since it treats the CT volume as a magic-cube and $N^3$-cube partition-and-recovery process matches with the rule of playing a magic-cube. Extensive experiments on two public CT multi-organ datasets demonstrate the effectiveness of MagicNet, and noticeably outperforms state-of-the-art semi-supervised medical image segmentation approaches, with +7% DSC improvement on MACT dataset with 10% labeled images.
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The task of referring video object segmentation aims to segment the object in the frames of a given video to which the referring expressions refer. Previous methods adopt multi-stage approach and design complex pipelines to obtain promising results. Recently, the end-to-end method based on Transformer has proved its superiority. In this work, we draw on the advantages of the above methods to provide a simple and effective pipeline for RVOS. Firstly, We improve the state-of-the-art one-stage method ReferFormer to obtain mask sequences that are strongly correlated with language descriptions. Secondly, based on a reliable and high-quality keyframe, we leverage the superior performance of video object segmentation model to further enhance the quality and temporal consistency of the mask results. Our single model reaches 70.3 J &F on the Referring Youtube-VOS validation set and 63.0 on the test set. After ensemble, we achieve 64.1 on the final leaderboard, ranking 1st place on CVPR2022 Referring Youtube-VOS challenge. Code will be available at https://github.com/Zhiweihhh/cvpr2022-rvos-challenge.git.
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Referring image segmentation aims to segment the target object described by a given natural language expression. Typically, referring expressions contain complex relationships between the target and its surrounding objects. The main challenge of this task is to understand the visual and linguistic content simultaneously and to find the referred object accurately among all instances in the image. Currently, the most effective way to solve the above problem is to obtain aligned multi-modal features by computing the correlation between visual and linguistic feature modalities under the supervision of the ground-truth mask. However, existing paradigms have difficulty in thoroughly understanding visual and linguistic content due to the inability to perceive information directly about surrounding objects that refer to the target. This prevents them from learning aligned multi-modal features, which leads to inaccurate segmentation. To address this issue, we present a position-aware contrastive alignment network (PCAN) to enhance the alignment of multi-modal features by guiding the interaction between vision and language through prior position information. Our PCAN consists of two modules: 1) Position Aware Module (PAM), which provides position information of all objects related to natural language descriptions, and 2) Contrastive Language Understanding Module (CLUM), which enhances multi-modal alignment by comparing the features of the referred object with those of related objects. Extensive experiments on three benchmarks demonstrate our PCAN performs favorably against the state-of-the-art methods. Our code will be made publicly available.
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Continual Learning is considered a key step toward next-generation Artificial Intelligence. Among various methods, replay-based approaches that maintain and replay a small episodic memory of previous samples are one of the most successful strategies against catastrophic forgetting. However, since forgetting is inevitable given bounded memory and unbounded tasks, how to forget is a problem continual learning must address. Therefore, beyond simply avoiding catastrophic forgetting, an under-explored issue is how to reasonably forget while ensuring the merits of human memory, including 1. storage efficiency, 2. generalizability, and 3. some interpretability. To achieve these simultaneously, our paper proposes a new saliency-augmented memory completion framework for continual learning, inspired by recent discoveries in memory completion separation in cognitive neuroscience. Specifically, we innovatively propose to store the part of the image most important to the tasks in episodic memory by saliency map extraction and memory encoding. When learning new tasks, previous data from memory are inpainted by an adaptive data generation module, which is inspired by how humans complete episodic memory. The module's parameters are shared across all tasks and it can be jointly trained with a continual learning classifier as bilevel optimization. Extensive experiments on several continual learning and image classification benchmarks demonstrate the proposed method's effectiveness and efficiency.
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Diffractive optical networks provide rich opportunities for visual computing tasks since the spatial information of a scene can be directly accessed by a diffractive processor without requiring any digital pre-processing steps. Here we present data class-specific transformations all-optically performed between the input and output fields-of-view (FOVs) of a diffractive network. The visual information of the objects is encoded into the amplitude (A), phase (P), or intensity (I) of the optical field at the input, which is all-optically processed by a data class-specific diffractive network. At the output, an image sensor-array directly measures the transformed patterns, all-optically encrypted using the transformation matrices pre-assigned to different data classes, i.e., a separate matrix for each data class. The original input images can be recovered by applying the correct decryption key (the inverse transformation) corresponding to the matching data class, while applying any other key will lead to loss of information. The class-specificity of these all-optical diffractive transformations creates opportunities where different keys can be distributed to different users; each user can only decode the acquired images of only one data class, serving multiple users in an all-optically encrypted manner. We numerically demonstrated all-optical class-specific transformations covering A-->A, I-->I, and P-->I transformations using various image datasets. We also experimentally validated the feasibility of this framework by fabricating a class-specific I-->I transformation diffractive network using two-photon polymerization and successfully tested it at 1550 nm wavelength. Data class-specific all-optical transformations provide a fast and energy-efficient method for image and data encryption, enhancing data security and privacy.
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